single_linkage_test

single_linkage_test, a MATLAB code which calls single_linkage(), which demonstrates MATLAB's single linkage clustering functions.

Licensing:

The computer code and data files described and made available on this web page are distributed under the MIT license

Related Data and Programs:

asa058, a MATLAB code which implements the k-means data clustering algorithm, by david sparks. this is a version of applied statistics algorithm 58.

asa113, a MATLAB code which implements a clustering algorithm using transfers and swaps, by banfield and bassill. this is a version of applied statistics algorithm 113.

asa136, a MATLAB code which implements a clustering algorithm, by hartigan and wong. this is a version of applied statistics algorithm 136.

cities, a dataset directory which contains sets of information about cities and the distances between them;

hartigan, a dataset directory which contains datasets for testing clustering algorithms;

kmeans, a MATLAB code which contains several different algorithms for the k-means problem, which organizes a set of n points in m dimensions into k clusters;

lorenz_ode_cluster_test, a MATLAB code which takes a set of n points on a trajectory of solutions to the lorenz equations, and applies the k-means algorithm to organize the data into k clusters.

martinez, a dataset directory which contains datasets for computational statistics, including cluster analysis;

sammon_data, a MATLAB code which generates six sets of m-dimensional data for cluster analysis.

spaeth, a dataset directory which contains datasets for cluster analysis;

spaeth2, a dataset directory which contains datasets for cluster analysis;

Source Code:

• single_linkage_test.m calls all the tests.
• single_linkage_test.sh runs all the tests.
• single_linkage_test.txt the output file;

• single_linkage_png a plot of the single linkage tree.
• timestamp.m is a script which prints a timestamp;
• jb13_xy.txt the (X,Y) coordinates of 13 points;