control_bio_test

control_bio_test, a MATLAB code which calls control_bio(), which optimizes a given cost functional of a biological model using optimal control, based on work by Suzanne Lenhart and John Workman.

Licensing:

The computer code and data files made available on this web page are distributed under the MIT license

Related Data and Programs:

control_bio, a MATLAB code which optimizes a given cost functional of a biological model using optimal control, based on work by Suzanne Lenhart and John Workman.

Source Code:

• control_bio_test.m, calls all the tests;
• control_bio_test.sh, runs all the tests;
• control_bio_test.txt, the output file;

• test01.m, optimizes "Introductory Example" defined by opt01.m.
• test01_cost.png
• test01_lambda.png
• test01_u.png
• test01_x.png

• test02.m, optimizes "Mold and Fungicide" defined by opt02.m.
• test02_cost.png
• test02_lambda.png
• test02_u.png
• test02_x.png

• test03.m, optimizes "Bacteria" defined by opt03.m.
• test03_cost.png
• test03_lambda.png
• test03_u.png
• test03_x.png

• test04.m, optimizes "Bounded Case" defined by opt04.m.
• test04_cost.png
• test04_lambda.png
• test04_u.png
• test04_x.png

• test05.m, optimizes "Cancer" defined by opt05.m.
• test05_cost.png
• test05_lambda.png
• test05_u.png
• test05_x.png

• test06.m, optimizes "Fish Harvesting" defined by opt06.m.
• test06_cost.png
• test06_lambda.png
• test06_u.png
• test06_x.png

• test07.m, optimizes "Epidemic Model" defined by opt07.m.
• test07_cost.png
• test07_lambda.png
• test07_u.png
• test07_x.png

• test08.m, optimizes "HIV Treatment" defined by opt08.m.
• test08_cost.png
• test08_lambda.png
• test08_u.png
• test08_x.png

• test09.m, optimizes "Bear Populations" defined by opt09.m.
• test09_cost.png
• test09_lambda.png
• test09_u.png
• test09_x.png

• test10.m, optimizes "Glucose Model" defined by opt10.m.
• test10_cost.png
• test10_lambda.png
• test10_u.png
• test10_x.png

• test11.m, optimizes "Timber Harvesting" defined by opt11.m.
• test11_cost.png
• test11_lambda.png
• test11_u.png
• test11_x.png

• test12.m, optimizes "Bioreactor" defined by opt12.m.
• test12_cost.png
• test12_lambda.png
• test12_u.png
• test12_x.png

• test13.m, seeks a particular solution of the "Predator Prey Model" using search13.m and opt13.m.
• search13.m, uses the secant method to find a particular solution of the Predator Prey Model.
• test13_cost.png
• test13_lambda.png
• test13_u.png
• test13_x.png

• test14.m, optimizes "Invasive Plant Species" defined by opt14.m.
• test14_cost.png
• test14_lambda.png
• test14_u.png
• test14_x.png