January 27 2003 6:25:41.495 AM GENE_CLUSTER Arrange gene expression data into clusters. RANDOM_INITIALIZE Initialize RANDOM_NUMBER with user SEED = 1234567 Enter the name of the data file Data will be read from the file i1039.dat Spatial dimension is 14 Number of data points is 1152 Enter lower and upper number of clusters The program will try to determine the minimum energy of a clustering, for cluster sizes in the range: 1 25 Enter number of different random configurations to check For each number of clusters, the number of distinct initial random configurations to be checked will be 60 Enter the number of energy iterations For each initial random configuration, the number of times the program will recompute the cluster centers, cluster components, and energy is 40 Minimum and maximum data values: 1 -1.8550 1.9900 2 -1.8590 2.0720 3 -3.0840 2.8640 4 -3.2330 2.0280 5 -2.8830 3.1240 6 -3.0850 2.4090 7 -2.8020 4.3610 8 -2.8410 2.1490 9 -2.2110 2.9110 10 -1.2620 1.8150 11 -1.8970 4.4710 12 -2.4380 3.1440 13 -2.8540 2.2760 14 -2.6420 3.6100 Cluster Minimum Maximum Size Energy Energy 1 7659.5112 7659.5112 2 5843.7139 5843.7139 3 5336.6641 5550.6064 4 4928.3936 5207.4375 5 4599.8340 4866.9458 6 4434.5078 4660.8716 7 4303.7085 4471.7925 8 4179.2905 4360.3032 9 4069.4995 4283.4497 10 3981.8015 4173.8950 11 3892.9360 4119.7134 12 3837.0894 4050.6355 13 3767.6912 3931.8015 14 3706.6594 3905.6404 15 3661.3857 3873.7207 16 3595.5061 3807.9585 17 3572.1765 3747.7354 18 3522.6680 3672.2986 19 3462.0281 3637.4409 20 3448.1323 3578.9050 21 3397.6711 3606.9404 22 3372.1685 3527.0942 23 3352.7434 3509.3999 24 3305.5879 3462.7488 25 3283.6509 3428.3230 Energy table: Cluster Energy Size Energy /point Sqrt(E/Pt) 1 7659.5112 6.6489 2.5785 2 5843.7139 5.0727 2.2523 3 5336.6641 4.6325 2.1523 4 4928.3936 4.2781 2.0684 5 4599.8340 3.9929 1.9982 6 4434.5078 3.8494 1.9620 7 4303.7085 3.7359 1.9328 8 4179.2905 3.6279 1.9047 9 4069.4995 3.5326 1.8795 10 3981.8015 3.4564 1.8591 11 3892.9360 3.3793 1.8383 12 3837.0894 3.3308 1.8250 13 3767.6912 3.2706 1.8085 14 3706.6594 3.2176 1.7938 15 3661.3857 3.1783 1.7828 16 3595.5061 3.1211 1.7667 17 3572.1765 3.1008 1.7609 18 3522.6680 3.0579 1.7487 19 3462.0281 3.0052 1.7336 20 3448.1323 2.9932 1.7301 21 3397.6711 2.9494 1.7174 22 3372.1685 2.9272 1.7109 23 3352.7434 2.9104 1.7060 24 3305.5879 2.8694 1.6939 25 3283.6509 2.8504 1.6883 Data is to be normalized. Minimum and maximum data values: 1 -0.5739 0.6842 2 -0.7756 0.7973 3 -0.7354 0.8056 4 -0.9113 0.5365 5 -0.7803 0.8594 6 -0.9211 0.6910 7 -0.7600 0.8340 8 -0.6569 0.7289 9 -0.8954 0.9364 10 -0.6443 0.6575 11 -0.7170 0.8758 12 -0.8463 0.7904 13 -0.7807 0.7852 14 -0.8858 0.8087 Cluster Minimum Maximum Size Energy Energy 1 1122.3461 1122.3461 2 848.6522 848.6541 3 772.3510 781.3070 4 710.0990 721.2944 5 666.3009 690.2971 6 640.7913 667.6234 7 619.6815 631.0928 8 600.5483 614.5867 9 585.4636 597.9563 10 571.0112 585.0357 11 559.0080 579.0814 12 548.3000 559.2564 13 538.6012 550.8388 14 528.7142 544.7723 15 520.5016 538.4674 16 513.7814 526.3943 17 507.0007 518.9861 18 497.0373 510.5944 19 494.9773 508.9853 20 488.3473 503.3190 21 483.2176 497.9528 22 477.2139 494.8537 23 471.4969 487.6688 24 466.8323 478.3756 25 463.1077 476.9146 Energy table: Cluster Energy Size Energy /point Sqrt(E/Pt) 1 1122.3461 0.9743 0.9870 2 848.6522 0.7367 0.8583 3 772.3510 0.6704 0.8188 4 710.0990 0.6164 0.7851 5 666.3009 0.5784 0.7605 6 640.7913 0.5562 0.7458 7 619.6815 0.5379 0.7334 8 600.5483 0.5213 0.7220 9 585.4636 0.5082 0.7129 10 571.0112 0.4957 0.7040 11 559.0080 0.4852 0.6966 12 548.3000 0.4760 0.6899 13 538.6012 0.4675 0.6838 14 528.7142 0.4590 0.6775 15 520.5016 0.4518 0.6722 16 513.7814 0.4460 0.6678 17 507.0007 0.4401 0.6634 18 497.0373 0.4315 0.6569 19 494.9773 0.4297 0.6555 20 488.3473 0.4239 0.6511 21 483.2176 0.4195 0.6477 22 477.2139 0.4142 0.6436 23 471.4969 0.4093 0.6398 24 466.8323 0.4052 0.6366 25 463.1077 0.4020 0.6340 GENE_CLUSTER Normal end of execution.