BASS (random package on Github):

  How to cite this software

  Simply cite the repository:

  "BASS: Biomedical Analysis Software Suite". https://github.com/drcgw/bass.

  There is no current scholarly reference to use for this software. Once 
  our paper is published, you can use the reference(s) printed here. Please, 
  please, please give us credit if you use this suite. It makes our coders 
  feel important and contributes to funding for our work. Thanks.

CLAWPACK:

  see the page:

  http://www.clawpack.org/about.html#citing-this-work

DEAL.II:

  Referencing the library

  In addition to the terms imposed by the LGPL v2.1 or later, we ask for 
  the following courtesy:
  Every publication presenting numerical results obtained with the help of 
  deal.II should state the name of the library and cite the canonical 
  deal.II reference listed at the top of the publications page.
  This is the usual, fair way of giving credit to contributors to a scientific 
  result. In addition, it helps us justify our effort in developing deal.II 
  as an academic undertaking.
  We keep a list of publications using deal.II. Feel free to let us know 
  about your publications.

FENICS:

  How to cite us
  If you use FEniCS in your research, the developers would be grateful if 
  you would cite the relevant publications. FEniCS is organized as a 
  collection of components, so to give proper credit to the developers of 
  FEniCS, please cite the indicated references for each relevant component.

  A more extensive bibliography can be found at the bottom of this page. 
  The bibliography is also available in BibTeX format.

  FEniCS
  A. Logg, K.-A. Mardal, G. N. Wells et al. (2012). 
  Automated Solution of Differential Equations by the Finite Element Method, 
  Springer. [doi:10.1007/978-3-642-23099-8]

  etc, etc

GSL:

  If you would like to refer to the GNU Scientific Library in a journal article, 
  the recommended way is to cite the reference manual, e.g. M. Galassi et al, 
  GNU Scientific Library Reference Manual (3rd Ed.), ISBN 0954612078.

  If you want to give a url, use "http://www.gnu.org/software/gsl/".

IFISS:

  Click here for the relevant BibTex citations:

  @article{ers07,
   author    = "Howard Elman and Alison Ramage and David Silvester",
   title     = "Algorithm {866}: {IFISS}, a {M}atlab toolbox for modelling
                incompressible flow",
   journal   = "ACM Trans. Math. Softw.",
   volume    = "33",
   pages     = "2--14,",
   year      = "2007"
  }

  @misc{ifiss,
  author = "David  Silvester and Howard  Elman and Alison Ramage",
  title = "{I}ncompressible {F}low and {I}terative {S}olver {S}oftware ({IFISS})
           version 3.3",
  month ="October",
  year = "2013",
  note = "{\tt http://www.manchester.ac.uk/ifiss/}"
  }

MCELL:

  MCell and CellBlender are:

  Copyrighted
  Free of charge
  Available under a GPLv2 licence
  We request that all publications resulting from MCell simulations:

  Acknowledge the authors and granting institutions
  Cite specific publications as indicated on our Publications page